Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPKVSVIMTSYNKSDYVAKSISSILSQTF---SDFELFIMDDNSNEETLNVIRPFL-N--DNRVRFYQSD-ISGVKERTEKTRYAALINQAIEMAEGEYITYATDDNI-YMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIV--K---ETV----RPAAQVTW---NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFYPFYPLDEELDLNYITDQSIHFQLFELEKNEFVRNLPPQRNCRELRESLKKLGMG
3F1Y Chain:A ((94-309))-LTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAASHGAEVYSENELMSGYGDAHG-------K-GDA-MWRALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAY--RRP-------EEDGGGRVTELTAKPLFNLFYPELAGFVQPLAGEFVADRELFCSI----P-FL---TGY--AVETGIMIDVLKKVGLGAMAQVDLGERQNR--------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3F1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 959 -7892 -8.23 -41.76
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -8.23
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.358

(partial model without unconserved sides chains):
PDB file : Tito_3F1Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3F1Y-query.scw
PDB file : Tito_Scwrl_3F1Y.pdb: