Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMNWRALSQTKQDRIWSEVNKIIKWKPGSRCHHIIPPDPYRVFDISSAMSSKAGHNDVSGVLSDLETSILKAFQLGTGKNDVMYALDWQHDGYTFSPHQAMPKDEFGEWPVPVFPNGDYYFFFHQDFSWGLLGDPWKCAITVFGEELLEAIDNDPPILFRNK
1D4B Chain:A ((1-122))MEYLSALNPSDLLRSVSNISS----EFGRRVWTSAPP-PQRPFRVCDH-KRTIRKGLTAATRQELLAKALETLLLNG-VLTLVL----EEDGTAVDSEDFFQL----------LEDDTCLMVLQSGQSW-------------------SPTRSGVLHHHHHH


General information:
TITO was launched using:
RESULT:

Template: 1D4B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 280 -29406 -105.02 -241.03
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -105.02
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.280

(partial model without unconserved sides chains):
PDB file : Tito_1D4B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1D4B-query.scw
PDB file : Tito_Scwrl_1D4B.pdb: