Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDREKQQLSIEAARLYYQSDYSQQQIAEQLNISRPTVSRLLQYAKEKGYVQIRVMDPFEDLDALGSILEEKYGLLEAHVVFSPTPDYAGITHDLSRYGAEYMHETVKDGDIVGVSWGTTMYQIAQNM-QPKQVKGVEVVQLKGGISHSRVNTYSAETIQLFAEAFQTMPRYLP-LPVVFDNADVKRMVEKDRHIERIIEMGKQANIALFTVGT--VRDEALLFRLGYFNEEEKALLKKQAVGDICSRFFDAKGNICSSAINDRTIGVELQDLRLKERSILVAGGSRKVSSIHGALTGKYANVLIIDQHTARALVNDL
2W48 Chain:B ((8-314))------RLIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKRGREQGIVTIAINYDYNENLWLEQQLKQKFGLKEAVVASSDGLLEEEQLSAMGQHGALLVDRLLEPGDIIGFSWGRAVRSLVENLPQRSQSRQVICVPIIGGPSGKLESRYHVNTLTYGAAARLKAESHLADFPALLDNPLIRNGIMQSQHFKTISSYWDSLDVALVGIGSPAIRDGANWHAF-YGSEESDDLNARHVAGDICSRFYDINGGLVDTNMSEKTLSIEMAKLRQARYSIGIAMGEEKYSGILGALHGRYINCLVTNRETAELLL---


General information:
TITO was launched using:
RESULT:

Template: 2W48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1565 -54335 -34.72 -179.32
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -34.72
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.476

(partial model without unconserved sides chains):
PDB file : Tito_2W48.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2W48-query.scw
PDB file : Tito_Scwrl_2W48.pdb: