Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQPPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMG--VWAKLNSNVGDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD |
| 4DVE Chain:A ((57-97)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAGGLLGPKYGTISVGAFLALALIGLPVLTGGNGGAASFLG----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DVE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20932 for 188 contacts (-111.3/contact) +
2D Compatibility (PS) -3781 + (NN) 1675 + (LL) 8100
1D Compatibility (HY) 800 + (ID) 350
Total energy: -14488.0 ( -77.06 by residue)
QMean score : 0.147
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