Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYSEVELLSRAHQLFAGDSRRPGLDAGTTPYGDLLSRAADLNVGAGQRRYQLAVDHSRAALLSAARTDAAAGAVITGAQRDRAWARRSTGTVLDEARSDTTVTAVMPIAQREAIRRRVARLRAQRAHVLTARRRARRHLAALRALRYRVAHGPGVALAKLRLPSPSGRAGIAVHAALSRLGRPYVW---GATGPNQ----------FDCSGLVQWAYAQAGVHLDRTTYQQINEGIPVPRSQVRPGDLVFPHPGHVQ---LAIGNNLVVEAPHAGASVRVSSLGNNVQIRRPLSGR |
4JXB Chain:B ((10-122)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------VVIARGLSQRGVPFSWAGGGISGPTRGTGTGINTVGFDASGLIQYAYAGAGLKLPRSSGQMYKVGQKVLPQQARKGDLIFYGPEGTQSVALYLGKGQMLE---VGDVVQVSPVRTN---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JXB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47778 for 635 contacts (-75.2/contact) +
2D Compatibility (PS) -10791 + (NN) -5945 + (LL) 13476
1D Compatibility (HY) -6400 + (ID) 2000
Total energy: -59438.0 ( -93.60 by residue)
QMean score : 0.438
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