Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDRIHVQPAHLRQAAAHHQQTADYLRTVPSSHDAIRESLDSLGPIFSELRDTGRELLELRKQCYQQQADNHADIAQNLRTSAAMWEQHERAASRSLGNIIDGSR
4LWS Chain:A ((35-130))
---QSAVDRAAMAQAAQDIEQSANAIRGMQNQLASAKDQL--RSHWEGDASMAFEAVFNRFNEDFSRVLKALDGMHESLVQTRITYEAREEAAQQSVNRVQ----
General information:
TITO was launched using:
RESULT:
Template:
4LWS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5144 for 487 contacts (10.6/contact) +
2D Compatibility (PS) -10803 + (NN) -4735 + (LL) -96
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -12840.0 ( -26.37 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_4LWS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LWS-query.scw
PDB file :
Tito_Scwrl_4LWS.pdb
: