Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFLAGVLCMCAAAASALFGSWSLCHTPTADPTALALRAMAPTQLAAAVMLAAGGVVAVAAPGHTALMVVIVCIAGAVGTLAAGSWQSAQYALRRETASPTANCVGSCAVCTQACH
5IE9 Chain:A ((1-103))
-MEAKTMKDMQKEVDAYIGQFK---EGYFSPLAMMARLTEEMGELAREVNHYYGE-RSIEEELGDVLFVMICMANSLNIDLETAHNIVMNKFNTRDKDR----------------
General information:
TITO was launched using:
RESULT:
Template:
5IE9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46226 for 510 contacts (-90.6/contact) +
2D Compatibility (PS) -10434 + (NN) -7966 + (LL) 1704
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -65072.0 ( -127.59 by residue)
QMean score : -0.113
(partial model without unconserved sides chains):
PDB file :
Tito_5IE9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5IE9-query.scw
PDB file :
Tito_Scwrl_5IE9.pdb
: