Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSLVRPDLPVRIGVQLQPQHA-----------PHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRFGTAGSRLDDLAAALPRIKARLGKL----------------NPPPTR--DIPVLIGGGGERKTLRLVAEYADIWHSFT-AGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPDYDLSAAAALCRWRDGR |
| 3RAO Chain:A ((18-260)) | ------YFQGVEYGFWLPIFGGWLRNVNDESMPPTFEYAKQTAQAAEQLGFSTTLIAELNLNDIKGVSAPSLEAWTTAAALAAVTDRLEIMTAVR-PGFHNPAVTAKMAANIDQLSNGRFTLNVVSAWWEEEAKQYGGVFTAHDERYDRTEEFVTILKGLWKEEEFSYKGNFYELHHTHLSPKPVQKQGIKLYAGGESKR-GKEVIVNHADAYVMHGGTVEEVSVKIEDMKNRRKKVTEE------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RAO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95869 for 1469 contacts (-65.3/contact) +
2D Compatibility (PS) -22624 + (NN) -15143 + (LL) 3624
1D Compatibility (HY) -5600 + (ID) 2200
Total energy: -137812.0 ( -93.81 by residue)
QMean score : 0.498
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