Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLELAILGLLIESPMHGYELRKRLTGLLGAFRAFSYGSLYPALRRMQADGLIAENAAPAGTPVRRARRVYQLTDKGRRRFGELVADTGPHNYTDDGFGVHLAFFNRTPAEARMRILEGRRRQVEERREGLREAVARA------SSSFDRYTRQLHQLGLESSEREVKWLNELIAAERAAPNPAEQT
1YG2 Chain:A ((2-178))
SLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMGEQGLVTCVLE-----------VYSITQAGRSALGEWFDQPTAHPTVRDEFSAKLMACSVQSAEPYRLQLAELVEESRKLVAHYQEIEAAYYANPAVLDKQQRLERLTLRRNLLVRQAWIQWADEVLAELNAM-------
General information:
TITO was launched using:
RESULT:
Template:
1YG2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71918 for 1010 contacts (-71.2/contact) +
2D Compatibility (PS) -17780 + (NN) -8621 + (LL) 540
1D Compatibility (HY) -6000 + (ID) 1900
Total energy: -105679.0 ( -104.63 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_1YG2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YG2-query.scw
PDB file :
Tito_Scwrl_1YG2.pdb
: