Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSFDVVFVGHRRGEVRSDNAMLGLLCDAAFDELTRPDVVIFPGGIGTRTLIHDQTVLDWVREAHRHTLLTTSVCTGGLVLAAAGLLNGLTATTHWRVQDLFNSLGARYVPQRVVEHLPERVITAAGVSSGIDMGLRLVELLVSREAAEASQLMIEYDPQPPVDAGSLAKASPATHRLALEFYQHRL
3NOQ Chain:B ((31-194))
LPDVQVHLIWKEPGPVVASSGLV-LQATTSFADCPPLDVICIPGGTGVGALMEDPQALAFIRQQAARARYVTSVSTGSLVLGAAGLLQGKRATTHWAYHELLAPLGAIPVHERVVRD--GNLLTGGGITAGIDFALTLAAELFDAATAQRVQLQLEYAPAPPFNAGS--------------------
General information:
TITO was launched using:
RESULT:
Template:
3NOQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103399 for 1228 contacts (-84.2/contact) +
2D Compatibility (PS) -17886 + (NN) -11362 + (LL) 1828
1D Compatibility (HY) -14400 + (ID) 3100
Total energy: -148319.0 ( -120.78 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_3NOQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NOQ-query.scw
PDB file :
Tito_Scwrl_3NOQ.pdb
: