Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAREISRQTFLRGAAGALAAGAVFGSVRATADPAASGWEALSSALGGKVLQPDDGPQFATAKQVFNTNYNGYTPAVIVTPTSQLDVQKAMAFAAANNLKVAPRGGGHSYVGASTANGAMVLDLRQLPGDINYDATTGRVTVTPATGLYAMHQVLAAAGRGIPTGTCPTVGVAGHALGGGLGANSRHAGLLCDQLTSASVVLPSGQAVTASATDHPDLFWALRGGGGGNFGVTTSLTFATFPSGDLDVVNLNFPPQSFAQVLVGWQNWLRTA-DRGSWALADATVDPL--------GTHCRILATCPAGSGGSVAAAIVSAVGT-QPTGTENHTFNYLDLVRYLAVGNLNPSPL----GYVGG-SDVFTTITPATAQGIASAVDAFPRGAGRMLAIMHALDGALATVSPGATAFPWRRQSALVQWYVETSGSPSE---ATSWLNTAHQAVRAYSVGGYVNYL---EVNQPPARYFGPNLSRLSAVRQKYDPSRVMFSGLNF |
3W8X Chain:B ((11-457)) | -------------------------------DPATLA--AFSAAFRGELIWPSDA-DYDEARRIWNGTID-RRPALIARCTSTPDVVAAVSFARKSGLLVAVRGGGHSMAGHSVCDGGIVIDL-SLMNSIKVSRRLRRARAQGGCLLGAFDTATQAHMLATPAGVVSHTGLGGLVLGGGFGWLSRKYGLSIDNLTSVEIVTADGGVLTASDTENPDLFWAVR-GGGGNFGVVTAFEFDLHRVGPVRFASTYYSLDEGPQVIRAWRDHMATAPDELTWALYLRLAPPLPELPADMHGKPVICAMSCWIGDPHEGERQLESILHAGKPHGLTKATLPYRALQAYSFPGAVVPDRIYTKSGYLNELSDEATDTVLEHAADIASPFT--------QLELLY-LGGAVARVPDDATAYP-NRQSPFVTNLAAAWMDPTEDARHTAWAREGYRALAGHLSGGYVNFMNPGEADRTREAYGAAKFERLQGVKAKYDPTNLF------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W8X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200320 for 3715 contacts (-53.9/contact) +
2D Compatibility (PS) -45935 + (NN) -21791 + (LL) 3164
1D Compatibility (HY) -21200 + (ID) 7400
Total energy: -293482.0 ( -79.00 by residue)
QMean score : 0.463
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