Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYLAGAAQIGGVMVGAPLVIGMTRQVRARWEGRAGAGLLQPWRDLLKQLGKQQITPAGTTIVFAAAPV-IVAGTTLLIAAIAPLVATGSPLDPSADLFAVVGLLFLGTVALTLAGIDTGTSFGGMGASREITIAALVEPTILLAVFALSIPAGSANLGALVASTIDHPGHVVSLAGVLAFVALVIVIVAETGRLPVDNPATHLELTMVHEAMVLEYAGPRLALVEWAAGMRLTVLLALLANLFLPWGIAGAAPTALDVLTGVVAVAAKVAILAVLLATFEVFLAKLRLFRVPELLAGSFLLALLAVTAANFFTVGA |
| 4OMH Chain:A ((13-292)) | --------------IGRSSVRPYLEECTRRFQEMFDRHVVTRPTKV--ELTDAELREVIDDCNAAVAPLGKTVSDERWISYVGVVLWSQSPRHIK-DMEAFKAVCVLNCVTFVWDDMD-----------PALHDFGLFLPQLRKICEKYYGPEDAEVAYEAARALVTSDHMF---RDSPIKAALCTTSPEQYFRFRVTDIGVDFWMKMSYPIYRHPEFTEHAKT---SLAARMTTRGLTIVNDFYSYDREVSLGQITNCFRLC-DVSDETAFKEFFQARLDDMIEDIECIKAFDQLTQDVFLDLIYGNFVWTTSN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OMH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -272086 for 2295 contacts (-118.6/contact) +
2D Compatibility (PS) -29617 + (NN) -13071 + (LL) 2272
1D Compatibility (HY) -6400 + (ID) 1650
Total energy: -320552.0 ( -139.67 by residue)
QMean score : 0.253
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