Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------MTGLLLAAI-------LAPLAASIASLITGWRRTTATLTALSATTVLACAVAMGFWMGSGAQFGLGGLLRADALTVVMLVVIGIVGTLATAASIGYIDTELAHGHIDGRSARLYGVLTPAFLCAMVLAVCANNIGVIWVAIEATTVITAFLVG-HRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFAARDSGAAAAGALNLDILAEHAAGL---DPGVARLAGGLLLIGYGAKAGLFPFHTWLADAHSQAPAPVSALMSG-VLLAVAFSVLIRLRPILDAVSGPAYLRNGLLVVGLATLLVAVLMLTVTGDVKRMLAYSSMEHMGLIAIAAAAGTTLAIAALLLHVLAHGIGKTVLFLAGGQLQAA-HDSTAIADITGVMRRSRLIGVSFAVGLIVLLGLPPF-AMFASELAIARSL----ANERLAWVLGAALLLIAIGFTALARN-SGRMLLGTPAAGAPAITVPATAAAALMV--GIVVSAALGITAGPLADLLGIAASNVGLP-------------------------------------------------------------------------------------------------------------------- |
3RKO Chain:B ((1-612)) | MNMLALTIILPLIGFVLLAFSRGRWSENVSAIVGVGSVGLAALVTAFIGVDFFANGEQTYSQPLWTWMSVG-DFNIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRG-------EEGYSRFFAYTN-LFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDPKNGAAAMKAFVVTRVGDVFLAFALFILYNEL--------GTLNFREMVELAPAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADA-MAGPTPVSALIHAATMVTAGVYLIARTHGLFLM---TPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQ---AWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLVTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVKGVTHSLPLIVLLILSTFVGALIVPPLQGVLPQTTELAHGSMLTLEITSGVVAVVGILLAAWLWLGKRTLVTSIANSAPGRLLSTWWYNAWGFDWLYDKVFVKPFLGIAWLLKRDPLNSMMNIPAVLSRFAGKGLLLSENGYLRWYVASMSIGAVVVLALLMVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -547891 for 4310 contacts (-127.1/contact) +
2D Compatibility (PS) -49747 + (NN) -28570 + (LL) 1264
1D Compatibility (HY) -30800 + (ID) 5700
Total energy: -661444.0 ( -153.47 by residue)
QMean score : 0.351
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