Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --MAKNQNRIRNRWEL--ITCGLGGHVTYAPDDAALAARLRAST---GLGEVWRCLRCGD--------FALGGPQGRGAPEDAPLIMRGKALRQ-----AIIIRALGVERLVRALVLALAAWAVW-----EFRGARGA------IQAT-LDRDLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGML-------AAYAVLQAVEGVGLWLLKRWGEYFAVVATSIF---------LPLEVHDLAKGITTTRVVTFSINVA--------AVVYLLISKRLFGVRGGRKAYDVERRGEQLLDLE--RAAMLT-- |
4XZZ Chain:A ((24-339)) | LNASDRLLEIMRLYQKQGLEMVGQKLDSYLADKSFWAEELQNKDTDFGYYQNKQFLFVANKSKPSLEFYEIENNMLKKINSSKALVGSKKGDKTLEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENPLLSSYDKVLKGEKAFLITYEDKFFPSTKEELSMILSSLFQWKEAWARGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSSINVIPYPNSQNKRLFYVVFDQDYKAYQHNKLSYSSNSQKELYIEIENNQVSIIMEK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XZZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -122795 for 1681 contacts (-73.0/contact) +
2D Compatibility (PS) -26558 + (NN) 1887 + (LL) 0
1D Compatibility (HY) -13200 + (ID) 1500
Total energy: -162166.0 ( -96.47 by residue)
QMean score : 0.163
|
|
|