Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLKVKGEGLGAQVTGV-DPKNLDDITTDEIRDIVYTNKLVVLKDVH-PSPREFIKLGRIIGQIVP-YYEPMYHHEDHPEIFVSSTEEGQGVPKTGAFWHIDYMFMPEPFAFSMVLPLAVPGHDRGTYFIDLARVWQSLPAAKRDPARGTVSTHDPRRHIKIRPSDVYRP-IGEVWDEINRTTPPIKWPTVIRHPKTGQEILYICATGTTKIEDKDGNPVDPEVLQELMAATGQLDPEYQSPFIHTQHYQVGDIILWDNRVLMHRAKH-GSAAGTLTTYRLTMLDGLKTPGYAA |
| 4Y0E Chain:A ((38-310)) | -TVEKLGEHIGARVNGIELRGDLSADRVEAIRLALAINKVLVFTEQHHLDDAGQYAFARLLGEPTLPHPTV---RSHGTELL---N-----LEGAANGWHTDVTFVDRIPKASVLRPVTLPSYGGATTWASTVAAYEQLPKPLRSLVDDLWATHTNLYD----------ERRAAYYTEFTSSRYETVHPVVRVHPETGERSLLLGQF-VKSFQDLPSAEF-ASLFQLLQARITK------LENTFRWNWRLGDVAIWDNRATQHYGIADFG-EQQRELHRVTLAGDVPVDVH-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Y0E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137566 for 2071 contacts (-66.4/contact) +
2D Compatibility (PS) -27998 + (NN) -13263 + (LL) 1844
1D Compatibility (HY) -5200 + (ID) 2550
Total energy: -184733.0 ( -89.20 by residue)
QMean score : 0.513
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