Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCTARTAEEIFVETIAVKTRILNDRVLLEAARAIGDRLIAGYRAGARVFMCGNGGSAADAQHFAAELTGHLIFDRPPLGAEALHANSSHLTAVANDYDYDTVFARALEGSARPGDTLFAISTSGNSMSVLRAAKTARELGVTVVAMTGESGGQLAEFADFLINVPSRDTGRIQESHIVFIHAISEHVEHALFAPRQ
2X3Y Chain:G ((41-217))
----------------VMAAMLADERLLATVRKVADACIASIAQGGKVLLAGNGGSAADAQHIAGEFVSRFAFDRPGLPAVALTTDTSILTAIGNDYGYEKLFSRQVQALGNEGDVLIGYSTSGKSPNILAAFREAKAKGMTCVGFTGNRGGEMRELCDLLLEVPSADTPKIQEGHLVLGHIVCGLVEHSIFG---
General information:
TITO was launched using:
RESULT:
Template:
2X3Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129982 for 1507 contacts (-86.3/contact) +
2D Compatibility (PS) -19672 + (NN) -11123 + (LL) 2076
1D Compatibility (HY) -16800 + (ID) 3900
Total energy: -179401.0 ( -119.05 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_2X3Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X3Y-query.scw
PDB file :
Tito_Scwrl_2X3Y.pdb
: