Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKKPRNPADYVIGDDVEVSDVDLKQEEVYVDGERLTDERVEQMASESLRLAREREANLIPGGKSLSGGSAHSPAVQVVVSKATHAKLKELARSRKMSVSKLLRPVLDEFVQRETGRILPRR
2BA3 Chain:A ((3-50))
------------------------------------------------------------SAVRKKSEVRQKTVVRTLRFSPVEDETIRKKAEDSGLTVSAYIRNAAL--------------
General information:
TITO was launched using:
RESULT:
Template:
2BA3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8201 for 201 contacts (-40.8/contact) +
2D Compatibility (PS) -5544 + (NN) -4474 + (LL) 5652
1D Compatibility (HY) -400 + (ID) 300
Total energy: -13267.0 ( -66.00 by residue)
QMean score : 0.622
(partial model without unconserved sides chains):
PDB file :
Tito_2BA3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BA3-query.scw
PDB file :
Tito_Scwrl_2BA3.pdb
: