Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSNQKAILAGGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGT----HAEAVEIIFDPTVTDYRTLLEFFFQIHDPTTKDRQGNDRGTSYRSAIFYFD---EQQKRIALDTI----ADVEASGLWPGKVVTEV-----SPAGDFWEAEPEHQDYLQRYPNGYTCHFVRPGWRLPRRTAESALRASLSPELGT
4D7L Chain:B ((71-228))
-----------GCYWGAEKLFWETPGVVYTSVGFAGGITPNPTYRETCTGRTNHTEIVEVVYDPTQVTFDELVVKAMEAHDPTQGYRQGNDTGTQYRSAIYTAGPNAEQQAQRAREIVEHYAPKLAAAGL--GRITTEILPLASTPAGEYYMAEDEHQQYLHKNPLGYCPH---------------------------
General information:
TITO was launched using:
RESULT:
Template:
4D7L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46868 for 994 contacts (-47.2/contact) +
2D Compatibility (PS) -15680 + (NN) -14462 + (LL) 2428
1D Compatibility (HY) -7200 + (ID) 3400
Total energy: -85182.0 ( -85.70 by residue)
QMean score : 0.741
(partial model without unconserved sides chains):
PDB file :
Tito_4D7L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4D7L-query.scw
PDB file :
Tito_Scwrl_4D7L.pdb
: