Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPFDDPQAELAWMFLQSLCEGGDLDEGFALLSNDFTYWSIV-TRTELDKKTFRRAVERRKQVF-EVNIELIRCVNEGETVVVEGHCDGVSADR--TRYDSPFVCIFETRDGMIISLREYSDTQSLAEVYPVACATPGRC
4H3U Chain:A ((25-154))
-----MTTPEIVTAWAAAWTG-TNPNALGTLFAADGTYVDHAIGATMTGREQISGWKARTDAMIENVHVTITKAYRAGDHVTIEAVYGGHI-KGAPTPFAVPMATLLRTRGEEITSDQDYYSLSSVLAQSGLPADWT---
General information:
TITO was launched using:
RESULT:
Template:
4H3U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58288 for 913 contacts (-63.8/contact) +
2D Compatibility (PS) -13921 + (NN) -7764 + (LL) 132
1D Compatibility (HY) -800 + (ID) 1000
Total energy: -81641.0 ( -89.42 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_4H3U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4H3U-query.scw
PDB file :
Tito_Scwrl_4H3U.pdb
: