Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTELDDVSSLPSSRRTAGDTWAITESVGATALGVAAARAVETAATNPLIRDEFAKVLVSSAGTAWARLADADLAWLDGDQLGRRVHRVACDYQAVRTHFFDEYFGAAVD-AGVRQVVILAAGLDARAYRLNWPAGTVVYEIDQ-PSVLEYKAGILQSHGAVPTARRHAVAVDLRDDWPAALIAAGFDGTQPTAWLAEGLLPYLPGDAADRLFDMVTALSAPGSQVAVEAFTMNTKGNTQRWNRMRERLGLDIDVQALTYHEPDRSDAAQWLATHGWQVHSVSNREEMARLGRAIPQDLVDETVRTTLLRGRLVTPAQPA |
| 5CVD Chain:A ((68-224)) | --------------------------------------------------------------------------------------------------FLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG---KRVRNYFCCGLQD-FT-------PEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGV------IL-------DDVDSSVCRDL--DVVRRIICSAGLSLLAE-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CVD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94904 for 1201 contacts (-79.0/contact) +
2D Compatibility (PS) -16383 + (NN) -4822 + (LL) 11700
1D Compatibility (HY) -7600 + (ID) 1000
Total energy: -113009.0 ( -94.10 by residue)
QMean score : 0.334
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