Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFPRTLAILAAAAALVVACSHGGTPTGSSTTSGASPATPVAVPVPRSCAEPAGIPALLSPRDKLAQLLVVGVRDAA-DAQAVVTNYHVGGILIGSDTDLTIFD--GALAEIVAGGGPLPLAVSVDEEGGRVSRLRSLIGGTGPSARELAQTRTVQQVRDLARDRGRQMRKLGITIDFAPVVDVTDAPDDTVIGDRSFGSDPATVTAYAGAYAQGLRDAGVLPVLKHFPGHGRGSGDSHNGGVTTPPLDDLVGDDLVPYRTLVTQAPVGVMVGHLQVPGL-TGSEPASLSKAAVNLLRTGTGYGAPPFDGPVFSDDLSGMAAISDRFGVSEAVLRTLQAGADIALWVTTKEVPAVLDRLEQALRAGELPMSAVDRSVVRVATMKGPNPGCGR |
5IOB Chain:G ((9-346)) | ----------------------------------STPPAPTAEDLAR-----AQIPE--QQRDQVASLVGVANYDQALDA----LNQGVGGIFIGSWTDENLLTEPGRNIEALREAVGRDFSVSIDFEGGRVQRATNILGDF-PSPR-VAQT-TPEQVEDLAEILGTGLAAHGVTVNFAPVVDV-DAWGLPV-----FSNDPAVAATYATAFAKGLSKVGITPVFKHFPGHG------------TPALDELKTYDLIPYGQALSETD-GAVVGHI-VPGLGTDGVPSSIDPATYQLLRSGDYPGGVPFDGVIYTDDLSG-SAISATHSPAEAVLASLKAGADQALWIDYGSLGSAIDRVDAAVSSGEYPQEQL-ASALRVQLL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5IOB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155268 for 2567 contacts (-60.5/contact) +
2D Compatibility (PS) -33558 + (NN) -18980 + (LL) 2512
1D Compatibility (HY) -19600 + (ID) 7100
Total energy: -231994.0 ( -90.38 by residue)
QMean score : 0.462
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