Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDATPNAVELTVDNAWFIAETIGAGTFPWVLAITMPYSDAAQRGAFVDRQRDELTRMGLLSPQGVINPAVADWIKVVCFPDRWLDLRYVGPASADGACELLRGIVALRTGTGKTSN------------KTGNGVVALRNAQLVTFTAMDIDDPRALVPILGVGLA---HRPPARFDEFSLPTRVGARADERLRSG---VPLGEVVDYLGIPASARPVVESVFSGPRSYVEIVAGCNRDGRHTTTEVGLSIVDTSAGRVLVSPSRAFDGEWVSTFSPGTPFAIAVAIQTLTACLPDGQWFPGQRVSRDFSTQSS |
| 4KXR Chain:C ((8-298)) | -----TDITVNVDGFWMLQALLDIRHV----------APELRCRPYVHPGMAVMREQGIVVNDAV-NEQVAARMKVLAAPD----LEVVALLSRG---KLLYGVIDDENQPPGSRDIPDNEFRVVLARRGQHWVSAVRVGNDITVDDVTVSDSASIAALVMDGLESIHHADPAAINAVNVPMEEMLEATKSWQESGFNVFSGGDLRRMGISAATVAALGQALSDPAAEVAVYARQYRDDAKGPSASVLSLKDGSGGRIALYQQAR---EAWLAICPATPQLVQVGVKTVLDTLPYGEW----------KTHS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KXR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135283 for 1931 contacts (-70.1/contact) +
2D Compatibility (PS) -28193 + (NN) -16363 + (LL) 1936
1D Compatibility (HY) -14800 + (ID) 3000
Total energy: -195703.0 ( -101.35 by residue)
QMean score : 0.443
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