Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDQRWLIDKSALVRL-TDSPDM-EIWSNRI-ERGLVHITGVTRLEVGFSAECGEI----ARREFREPPLSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVD-KDFDAIAALTGQKTERLTHRPPSA
3ZVK Chain:A ((1-126))
---MIYMLGTNICVYAINKHPDSYYNNLELLAKNNTIAISSIVLAELQYGVSKSKKKEQNQSKLDI-FLS-RLEIIDFSAKCTFYYGELRTELEQKGL--IIGNNDLLIASHAIAENATLVTNNIKEFKRIPN----------------
General information:
TITO was launched using:
RESULT:
Template:
3ZVK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40174 for 817 contacts (-49.2/contact) +
2D Compatibility (PS) -13147 + (NN) -8741 + (LL) 1108
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -64704.0 ( -79.20 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_3ZVK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZVK-query.scw
PDB file :
Tito_Scwrl_3ZVK.pdb
: