Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNNGRMLGVIGGSGFYT--FFGSDTRTVNSDTPYGQPSAPITIGTIGVHDVAFLPRHGAHHQYSAHAVPYRANMWALRALGVRRVFGPCAVGSLDPELEPGAVVVPDQLVDRTSGRADTYFDFGGV-HAAFADPYCPTLRAAVTGLPGVV-----DGGTMVVIQGPRFSTRAESQ-WFAAAGCNLVNMTGYPEAVLARELELCYAAIALVTDVDAGVAAGDGVKAADVFAAFGENIELLKRLVRAAIDRV---ADERTCTHCQHHAGVPLPFELP
3T94 Chain:E ((4-263))
-QNEKASIGIIGGSGLYDPGIF-SESKEIKVYTPYGQPSDFITIGKIGNKSVAFLPRHGRGHRIPPHKINYRANIWALKELGVRWVISVSAVGSLRMDYKLGDFVIPDQFIDMTKNREYSFFDGPVVAHVSMADPFCNSLRKLAIETAKELNIKTHESGTYICIEGPRFSTRAESRTWREVYKADIIGMTLVPEVNLACEAQMCYATIAMVTDYD--VFAEIPVTAEEVTRVMAENTEKAKKLLYALIQKLPEKPEEGSCSCCN------------
General information:
TITO was launched using:
RESULT:
Template:
3T94.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -194705 for 2106 contacts (-92.5/contact) +
2D Compatibility (PS) -27042 + (NN) -14677 + (LL) 428
1D Compatibility (HY) -21600 + (ID) 5650
Total energy: -263246.0 ( -125.00 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_3T94.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T94-query.scw
PDB file :
Tito_Scwrl_3T94.pdb
: