Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDPVSYTRKDSIAVISMDDGKVNALGPAMQQALNAAIDNADRDDVGALVITGNGRVFSGGFDLKILTSGEVQPAIDMLRGGFELAYRLLSYPKPVVMACTGHAIAMGAFLLSCGDHRVAAHAYNIQANEVAIGMTIPYAALEIMKLRLTRSAYQQATGLAKTFFGETALAAGFIDEIALPEVVVSRAEEAAREFAGLNQHAHAATKLRSRADALTAIRAGIDGIAAEFGL
4FN7 Chain:B ((1-229))
MSDPVSYTRKDSIAVISMDDGKVNALGPAMQQALNAAIDNADRDDVGALVITGNGRVFSGGFDLKILT---VQPAIDMLRGGFELAYRLLSYPKPVVMACTGHAIAMGAFLLSCGDHRVAAHAYNIQANEVAIGMTIPYAALEIMKLRLTRSAYQQATGLAKTFFGETALAAGFIDEIALPEVVVSRAEEAAREFAGLNQHAHAATKLRSRADALTAIRAGIDGIAAEF--
General information:
TITO was launched using:
RESULT:
Template:
4FN7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -177915 for 1976 contacts (-90.0/contact) +
2D Compatibility (PS) -25083 + (NN) -11366 + (LL) -92
1D Compatibility (HY) -30000 + (ID) 11300
Total energy: -255756.0 ( -129.43 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_4FN7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FN7-query.scw
PDB file :
Tito_Scwrl_4FN7.pdb
: