Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAPKKKVAGLIKLQIVAGQANPAPPVGPALGQHGVNIMEFCKAYNAATENQRGNVIPVEITVYEDRSFTFTLKTPPAAKLLLKAAGVAKGSAEPHKTKVAKVTWDQVREIAETKKTDLNANDVDAAAKIIAGTARSMGITVE
1OLN Chain:A ((7-138))
---------QIKLQLPAGKATPAPPVGPALGQHGVNIMEFCKRFNAETADKAGMILPVVITVYEDKSFTFIIKTPPASFLLKKAAGIEKGSSEPKRKIVGKVTRKQIEEIAKTKMPDLNANSLEAAMKIIEGTAKSMGIEV-
General information:
TITO was launched using:
RESULT:
Template:
1OLN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66918 for 955 contacts (-70.1/contact) +
2D Compatibility (PS) -15006 + (NN) -13605 + (LL) 672
1D Compatibility (HY) -12000 + (ID) 4400
Total energy: -111257.0 ( -116.50 by residue)
QMean score : 0.655
(partial model without unconserved sides chains):
PDB file :
Tito_1OLN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OLN-query.scw
PDB file :
Tito_Scwrl_1OLN.pdb
: