Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEAWFETVAIAQQRAKRRLPKSVYSSLIAASEKGITVADNVAAFSELGFAPHVIGATDKRDLSTTVMGQEVSLPVIISPTGVQAV-DPGGEVAVARAAAARGTVMGLSSFASKPIEEVIAANPKTF--FQVYWQGGRDALAERVERARQAGAVGLVVTTDWTFSHGR---DWGSPKIPEEMNLKTILRLSPEAITRPRWLWKFAKTLRPPDLRVPNQGRRGEPGPPFFAAYGEWMATPPPTWEDIGWLRELWGGPFMLKGVMRVDDAKRAVDAGVSAISVSNHGGNNLDGTPASIRALPAVSAAVGDQVEVLLDGGIRRGSDVVKAVALGARAVMIGRAYLWGLAANGQAGVENVLDILRGG--IDSALMGLGHASVHDLSPADILVPTGFIRDLGVPSRRDV |
2W0U Chain:C ((12-356)) | ------------EQHAKSVLPKSIYDYYRSGANDEETLADNIAAFSRWKLYPRMLRNVAETDLSTSVLGQRVSMPICVGATAMQRMAHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGPEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRF------------------------------------------------G---LAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVID------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2W0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -158693 for 2661 contacts (-59.6/contact) +
2D Compatibility (PS) -34454 + (NN) -18100 + (LL) 5532
1D Compatibility (HY) -26800 + (ID) 6650
Total energy: -239165.0 ( -89.88 by residue)
QMean score : 0.531
|
|
|