Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQTTQSPALIASQSSWRCVQAHDREGWLALMADDVVIEDPIGKSVTNPDGSGIKGKEAVGAFFDTHIAANRLTVTCEETFPSSSPDEIAHILVLHSEFDGGFTSEVRGVFTYRVNKAGLITNMRGYWNLDMMTFGNQE
2Z77 Chain:D ((6-135))
-----QSPALIASQSSWRCVQAHDREGWLALMADDVVIEDPIGKSVTNPDGSGIKGKEAVGAFFDTHIAANRLTVTCEETFPSSSPDEIAHILVLHSEFDGGFTSEVRGVFTYRVNKAGLITNMRGYWNLDMMTF----
General information:
TITO was launched using:
RESULT:
Template:
2Z77.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68144 for 967 contacts (-70.5/contact) +
2D Compatibility (PS) -14110 + (NN) -6348 + (LL) 456
1D Compatibility (HY) -17600 + (ID) 6500
Total energy: -112246.0 ( -116.08 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_2Z77.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z77-query.scw
PDB file :
Tito_Scwrl_2Z77.pdb
: