Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLNRFGAAVGVLAAGALVLSACGNDDNVTGGGATTGQASAKVDCGGKKTLKASGSTAQANAMTRFVNVFEQACPGQTLNYTANGSGAGISEFNGNQTDFGGSDVPLSKDEAAAAQRRCGSPAWNLPVVFGPIAVTYNLNSVSS--LNLDGPTLAKIFNGSITQWNNPAIQALNRDFTLPGERIHVVFRSDESGTTDNFQRYLQAASNGAWGK--GAGKSFQGGVGEGARGNDGTSAAAKNTPGSITYNEWSFAQAQHLTMANIVTSAGGDPVAITIDSVGQTIAGATIS-GVGNDLVLDTDSFYRPKRPGSYPIVLATYEIVCSKYPDSQVGTAVKAFLQ--STIGAGQSGLGDNGYIPIPDEFKSRLSTAVNAIA |
2Z22 Chain:A ((3-307)) | -------------------------------------------------SLTGAGATFPAPVYAKWADSYQKET-GNKINYQGIGSSGGVKQIIANTVDFGASDAPLT-DEKLATEGLF-----QFPTVIGGVVLAVNIPGIKSGELTLDGKTLGDIYLGTVKKWNDPAIVKLNPGVKLPDQNIAVVRRADGSGTSFVFTSYL-AKVNAEWKEKVGAGSTVNWPTGLGGKGNDGIAAFVQRLPGSIGYVEYAYAKQNNLAYTKLI-SADGKPVSPTEHSFSSAAKGVDWSKSFAQDLT-------NQKGDDVWPITSTTFILVHKEQKNAANGTEVLKFFDWGYTHGAKQANELD--YATLPAEVVEQVRAA----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z22.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81998 for 2660 contacts (-30.8/contact) +
2D Compatibility (PS) -32276 + (NN) -12815 + (LL) 2480
1D Compatibility (HY) -17600 + (ID) 5200
Total energy: -147409.0 ( -55.42 by residue)
QMean score : 0.423
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