Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRPEPPHHENAELAAMNLEMLESQPVPEIDTLREEIDRLDAEIL--------ALVKRRAEVSKAIGKARMASGGTRLVHSREMKVIERYSELGPD-------GKDLAILLLRLGRGRLGH
2GTV Chain:X ((2-91))
-------------------------IEKLAEIRKKIDEIDNKILKARWPWAEKLIAERNSLAKDVAEIKNQLGIPINDPEREKYIYDRIRKLCKEHNVDENIGIKIFQRLIEHNK-----
General information:
TITO was launched using:
RESULT:
Template:
2GTV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11331 for 435 contacts (-26.0/contact) +
2D Compatibility (PS) -8331 + (NN) -4282 + (LL) 1640
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -27504.0 ( -63.23 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_2GTV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GTV-query.scw
PDB file :
Tito_Scwrl_2GTV.pdb
: