Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSADNHQVPIEIRGLTKHF--GSVRALDGLDLTVREGEVHGFLGPNGAGKSTTLRILLGLVKADGGSV----RLLGGDPWTDAVDLHRHIAYVPGDVTLWPSLTGGETIDL-LARMRGGIDNAR-RAELIERFGLDP----TKKARTYSKGNRQKVSLISALSSHATLLLLDEPSSGLDPLMENVFQQCIGEARQR-GVTVLLSSHILAETEALCEKVTIIRAGKTVESGSLDALRHLSRTSIKAEMIGDPGDLSQIKGVEDISIEGTTVRAQVDSESLRELIQVLGHAGVRSLVSQPPTLEELFLRHYSLGPEVAAEQQVATP |
1OXV Chain:B ((2-247)) | -------VRIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKI-LDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIGEINEL---------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OXV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87564 for 1856 contacts (-47.2/contact) +
2D Compatibility (PS) -25321 + (NN) -4236 + (LL) 5408
1D Compatibility (HY) -16000 + (ID) 4000
Total energy: -131713.0 ( -70.97 by residue)
QMean score : 0.417
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