Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVDHKRIPKQVIVGVSGGIAAYKACTVVRQLTEASHRVRVIPTESALRFVGAATFEALSGEPVCTDVFADVPAVPHVHLGQQADLVVVAPATADLLARAAAGRADDLLTATLLTARCPVLFAPAMHTEMWLHPATVDNVATLRRRGAVVLEPATGRLTGADSGAGRLPEAEEITTLAQLLLERHDALPYDLAGRKLLVTAGGTREPIDPVRFIGNRSSGKQGYAVARVAAQRGADVTLIAGHTAGLVDPAGVEVVHVSSAQQLADAVSKHAPTADVLVMAAAVADFRPAQVATAKIKKGVEGPP-TIELLRNDDVLAGVVRARAHGQLPNMRAIVGFAAETGDANGDVLFHARAKLRRKGCDLLVVNAVGE-GRAFEVDSNDGWLLASDGTESALQHGSKTLMASRIVDAIVTFLAGCSS |
1U80 Chain:C ((5-218)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSG-PVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKI------DELTIKMVKNPDIVAGVAALKDHRPY-----VVGFAAET----NNVEEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDG-DKVLPLERKELLGQLLLDEIVT------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U80.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132864 for 1719 contacts (-77.3/contact) +
2D Compatibility (PS) -21902 + (NN) -8578 + (LL) 15536
1D Compatibility (HY) -16400 + (ID) 4350
Total energy: -168558.0 ( -98.06 by residue)
QMean score : 0.400
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