Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMGMGH
1UZN Chain:B ((9-247))
--------AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDT-------------ALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMGMGH
General information:
TITO was launched using:
RESULT:
Template:
1UZN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125913 for 1961 contacts (-64.2/contact) +
2D Compatibility (PS) -24689 + (NN) -8823 + (LL) 1588
1D Compatibility (HY) -28000 + (ID) 11150
Total energy: -196987.0 ( -100.45 by residue)
QMean score : 0.617
(partial model without unconserved sides chains):
PDB file :
Tito_1UZN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UZN-query.scw
PDB file :
Tito_Scwrl_1UZN.pdb
: