Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGANHVRNDPIMARLTVITTGGTISTTAGPDGVLRPTHCGATLIAGLDMDSDIEVVDLMALDSSKLTPADWDRIGAAVQEAFRGGADGVVITHGTDTLEETALWLDLTYAGSRPVVLTGAMLSADAPGADGPANLRDALAVAADPAARDLGVLVSFGGRVLQPLGLHKVANPDLCGFAGESLG----FTSGGVRLTRTKTRPYLGDLGAAVA-----PRVDIVAVYPGSDAVAMDACVAAGARAVVLEALGSGNAGAAVIEGVRRHCRDGSDPVVIAVSTRVAGARVGAGYGPGH-DLVEAGAVMVPRLPPSQARVLLMAALAANSPVADVIDRWG |
3ECA Chain:D ((81-310)) | --------------------------------------------------------------------------------------DGFVITHGTDTMEETAYFLDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAADKASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHNGKIDYQRTPARKHTSDTPFDVSKLNELPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGNLYKSVFDTLATAAKTGT---AVVRSSRVP---TGATTQDAEVDDAKYGFVASGTLNPQKARVLLQLAL-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ECA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159790 for 1814 contacts (-88.1/contact) +
2D Compatibility (PS) -24780 + (NN) -19187 + (LL) 5332
1D Compatibility (HY) -11200 + (ID) 4150
Total energy: -213775.0 ( -117.85 by residue)
QMean score : 0.459
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