Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSPATVLDSILEGVRADVAAREASVSLSEI--KAAAAAAPPPL-------DVMAALREPGIGVIAEVKRASPSAGALATIADPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARDLMTLDVDRDC---FARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTSGDPRAAVADLVTAGTHPSCPKPAR
1VC4 Chain:B ((12-253))--------------------------LGEIARKRASEVAPYPLPEPPSVPSFKEALLRPGLSVIAEVKRQSPSEGLIREV-DPVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAVDLPLLRKDFVVDPFMLEEARAFGASAALLIVALLGE-LTGAYLEEARRLGLEALVEVHTERELEIALEAGAEVLGINNRDLATLHINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEGL-FDAVLIGTSLMRAPDLEAALRELV-------------


General information:
TITO was launched using:
RESULT:

Template: 1VC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -158514 for 1987 contacts (-79.8/contact) +
2D Compatibility (PS) -25004 + (NN) -7907 + (LL) 2116
1D Compatibility (HY) -20400 + (ID) 5700
Total energy: -215409.0 ( -108.41 by residue)
QMean score : 0.573

(partial model without unconserved sides chains):
PDB file : Tito_1VC4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VC4-query.scw
PDB file : Tito_Scwrl_1VC4.pdb: