Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEHDFETISSETLHTGAIFALRRDQVRMPGGGIVTREVVEHFGAVAIVAMDDNGNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVDLDTAPGFSDESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVLRGEIVNSIAIAGVLAVHAVTTGFAQPRPLDTEWIDRPTAFAARRAER
5C8L Chain:B ((7-129))
------KTLSTRQIFKGRYLKIEQDQVQAPDGRTYTREYILHPGAAMMIPLLPNGNVVMIHQYRHAVKKVFLEFPAGKRD-HNEETLLTAKRELLEETGYEAKDWKFLTTIHPVIGYSNEHIDLYLARDL-----------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
5C8L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40057 for 760 contacts (-52.7/contact) +
2D Compatibility (PS) -13470 + (NN) -6040 + (LL) 6996
1D Compatibility (HY) -9600 + (ID) 2350
Total energy: -64521.0 ( -84.90 by residue)
QMean score : 0.741
(partial model without unconserved sides chains):
PDB file :
Tito_5C8L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5C8L-query.scw
PDB file :
Tito_Scwrl_5C8L.pdb
: