Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCGDQSDHVLQHW----TVDISID-EHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSV----------ARALSDLGKRMLKVSTHDIEAVTHQPARLLY
2L1T Chain:A ((1-109))
GMSADGSEYGRYFEQLQKVNLTVRLGDTGSFDGTAAITSLKGSLAWLELFGAEQPPPNTLSEGAEVSVSVWTGGALCRCDGRVETLRDDRQFAIRLVGRVRELQRREYF
General information:
TITO was launched using:
RESULT:
Template:
2L1T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10642 for 598 contacts (-17.8/contact) +
2D Compatibility (PS) -9414 + (NN) 3324 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -18932.0 ( -31.66 by residue)
QMean score : 0.319
(partial model without unconserved sides chains):
PDB file :
Tito_2L1T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L1T-query.scw
PDB file :
Tito_Scwrl_2L1T.pdb
: