Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MDQQSTRTDITVNVDGF-WMLQALLDIRHVAPELRCRPYVSTDSNDWLNEHPGMAVM----REQGIVVNDAVNEQ-VAARMKVLAAPDLEVV------ALLSRGKLLYGVIDD-ENQPPGSRDIPDNEFRVVLARRGQHWVSAVRVGNDITVDDVTVSDSASIAALV--MDGLESIHHADPAAINAVNVPMEEMLEATKSWQESGFNVF---SGGDLRRMGISAATVAALGQALSDPAAEVAVYARQYRDDAKGPSASVLSLKDGSGGRIALYQQARTAGSGEAWLAIC-----------PATPQLVQVGVKTV--------LDTLPYGEWKTHSRV----------------- |
| 4WL2 Chain:A ((1-346)) | CTRFVYLDPHNPDYPITARSMDWADDTETNLWIFPQELKRSGGAGQYSLEWTSKYGSVIASAFDGRKGMASTTDGVNEKGLAANVLWLAESEYPKTKPTAKKPGLSVAAWAQYVLDNFATVDEAVKSLQQEKFILVTKQ--------VEGQKRLATLHLSLSDSSGDSAIIEYIDGKQVIHHSKNYQVMTNSPTFDQQLTLNAYWDQIGGNVMLPGTNRAADRFVRASFYVKNVNPNKLIPG----VAEKGKIEKDKADLATAFSIIRNASVPYGYSLPDMPNIASTRWRTVVDHKSLQYFFESAVSPNIFWVDLKKINFAPRGGSAAKLDLGPNQSTIYSGQASGHFKPAQPFEFAG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WL2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56990 for 2150 contacts (-26.5/contact) +
2D Compatibility (PS) -30383 + (NN) 2411 + (LL) 1140
1D Compatibility (HY) -6800 + (ID) 2450
Total energy: -93072.0 ( -43.29 by residue)
QMean score : 0.116
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