Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVLDLFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAAR---HLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTE-LVEPYTEYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYMTGSDIVIDGGYTCP
3PK0 Chain:D ((5-254))-----MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS--GKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVL-TSSITGPITGYPGW-SHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVLP


General information:
TITO was launched using:
RESULT:

Template: 3PK0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152911 for 2189 contacts (-69.9/contact) +
2D Compatibility (PS) -27017 + (NN) -11879 + (LL) 384
1D Compatibility (HY) -16400 + (ID) 4950
Total energy: -212773.0 ( -97.20 by residue)
QMean score : 0.527

(partial model without unconserved sides chains):
PDB file : Tito_3PK0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PK0-query.scw
PDB file : Tito_Scwrl_3PK0.pdb: