Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MLDYLRDAAEIYRRSFAVIRAEADLARFPADVARVVVRLIHTCGQVDVAEHVAYTDDVVARAGAALAAGAPVLCDSSMVAAGITTSRLPADNQIVSLVADPRATELAARRQTTRSAAGVELCAERLPGAVLAIGNAPTALFRLLELVDEGAPPPAAVLGGPVGFVGSAQAKEELIERPRGMSYLVVRGRRGGSAMAAAAVNAIASDRE
1F2V Chain:A ((2-210))
PEYDYIRDGNAIYERSFAIIRAEADLSRFSEEEADLAVRMVHACGSVEATRQFVFSPDFVSSARAALKAGAPILCDAEMVAHGVTRARLPAGNEVICTLRDPRTPALAAEIGNTRSAAALKLWSERLAGSVVAIGNAPTALFFLLEMLRDGAPKPAAILGMPVGFVGAAESKDALAENSYGVPFAIVRGRLGGSAMTAAALNSLARPGL
General information:
TITO was launched using:
RESULT:
Template:
1F2V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -156461 for 1841 contacts (-85.0/contact) +
2D Compatibility (PS) -23394 + (NN) -17561 + (LL) 0
1D Compatibility (HY) -20400 + (ID) 5600
Total energy: -223416.0 ( -121.36 by residue)
QMean score : 0.698
(partial model without unconserved sides chains):
PDB file :
Tito_1F2V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F2V-query.scw
PDB file :
Tito_Scwrl_1F2V.pdb
: