Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTATASDDEAVTALALSAA-KGNGRALEAFIKATQQDVWRFVAYLS-DVGSADDLTQETFLRAIGAIPRFSAR-SSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHA-RGFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEPDDLTG
2Q1Z Chain:A ((8-183))
----SDRTDWVALMR-AIRDHRDEAAFAELFQHFAPKVKGFLMKSGSVASQAEECAQDVMATVWQKAHLFDPSRASVATWIFTIARNRRIDGLRKDRQPEPEDLFW-GPDSEPDQADVYEMQQENARLGRAIARLPEAQRALIERAFFGDLTHRELAAETGLPLGTIKSRIRLALDRLRQHM-------
General information:
TITO was launched using:
RESULT:
Template:
2Q1Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45001 for 1126 contacts (-40.0/contact) +
2D Compatibility (PS) -18496 + (NN) -8266 + (LL) 600
1D Compatibility (HY) -2400 + (ID) 1700
Total energy: -75263.0 ( -66.84 by residue)
QMean score : 0.294
(partial model without unconserved sides chains):
PDB file :
Tito_2Q1Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q1Z-query.scw
PDB file :
Tito_Scwrl_2Q1Z.pdb
: