Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAMVNTTTRLSDDALAFLSERHLAMLTTLRADNSPHVVAVGFTFDPKTHIARVITTGGSQKAVNADRSGLAVLSQVDG--ARWLSLEGRAAVNSDIDAV-RDAELRYAQRYRTP-------------RPNPRRVVIEVQIERVLGSADLLDRA
2AQ6 Chain:A ((5-144))
--------VFDDKLLAVISGNSIGVLATIKHDGRPQLSNVQYHFDPRKLLIQVSIAEPRAKTRNLRRDPRASILVDADDGWSYAVAEGTAQLTPPAAAPDDDTVEALIALYRNIAGEHSDWDDYRQAMVTDRRVLLTLPISHVYGLPP-----
General information:
TITO was launched using:
RESULT:
Template:
2AQ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44459 for 938 contacts (-47.4/contact) +
2D Compatibility (PS) -13945 + (NN) -7657 + (LL) 1348
1D Compatibility (HY) -6000 + (ID) 1500
Total energy: -72213.0 ( -76.99 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_2AQ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AQ6-query.scw
PDB file :
Tito_Scwrl_2AQ6.pdb
: