Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATAQEGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTN-F-DRVDFVYTDVHVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSN-EAYRELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE |
2J5B Chain:A ((39-163)) | ------------------------------------------------------------------------------RIFTAYNGFEPSGRIHIAQALITVMNTNNMIECGGQMIIYIADWFAKMNLK-MNGDIN----K----IRELGRYFIEVFKACGINLDGTRFIWASEFIASNPSYIERMLDIAEFSTI------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J5B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15908 for 676 contacts (-23.5/contact) +
2D Compatibility (PS) -11502 + (NN) -5048 + (LL) 10420
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -26388.0 ( -39.04 by residue)
QMean score : 0.293
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