Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIADEIQSGLACTGYPFACDHGGVLPDIYLLGKTLGGGAVPLSAMVADREIFGVVHPGEHGSTFGGNPLAAAIGTPVVSMVVWGECQARSAKLGAHLHQRLADLIGDGAVA--LRGLGWWADVDIERALAIGTDMSMRLADRGVLLKDTYGAALRFAPPLVITAQEID-C------AVRRFADALWEAGS
3NTJ Chain:C ((230-414))
FVADEVQTGLGRTGKLLCTHHYGVKPDVILLGKALSGGHYPISAILANDDVMLVLKPGEHGSTYGGNPLAAAICVEALKVLINEKLCENADKLGAPFLQNLKEQLKDSKVVREVRGKGLLCAIEFKNDLVNVWDICLKFKENGLITRSVHDKTVRLTPPLCITKEQLDECTEIIVKTVKFFDDNL-----
General information:
TITO was launched using:
RESULT:
Template:
3NTJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110163 for 1207 contacts (-91.3/contact) +
2D Compatibility (PS) -18803 + (NN) -5661 + (LL) 204
1D Compatibility (HY) -16800 + (ID) 3350
Total energy: -154573.0 ( -128.06 by residue)
QMean score : 0.218
(partial model without unconserved sides chains):
PDB file :
Tito_3NTJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NTJ-query.scw
PDB file :
Tito_Scwrl_3NTJ.pdb
: