Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSLTLSEASCIASASRWRHIIPAGVVCALIAGIGVGCHGGPSDVVGRAGPDRAHTSITLVAYAVP-EPGWSAVIPAFNASEQGRGVQVITSYGASADQSRGVA--DGKPADLVNFSVEPDIARLVKAGKVDK-D---WD---AD-A--------TKGIPFG-SVVTFVVRAGNPKNIRDWDDLLRPGI--EVITPSPLSS-GSAKWN-LLAPYAAKSDGGRNNQAGIDFVNTLVNEHVKLRPGSGREATDVFVQGSGDVLISYENEAIATERAGKPVQHVTPP-QTFKIENPLAVVATSTHLGAATAFRNFQYTVQAQKLWAQ-AGFRPVDPAVAADFADLFPVPAKLWTIADLGGWGSVDPQLFDKATGSITKIYLRATG |
| 4EDP Chain:A ((36-308)) | --------------------------------------------------------KLVVSTWGLNEDVLKETVFEPFAKEH-GVEIVLDIG--NNSERLTKMKNNPNSQIDITYLAE-SFAEQGVEAGIFDKLDYSKIPNASEMNEKAKSTVEAGYGPAYTLNSIGIVVDPSAGIEINSWEDLWKPELKNKIAIPDITTTNGPAMVEIAAEKAGVDVK-TDNGEAAFKELEAL-KPNVVKTYSKSSDLANMFSNGEIVAAVASDFAFGTISKAKPEVINVIPESGTYLNFNTININKNSKNKDLAYEFINYALSKEVQEKTAKALNESPVNKEV----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EDP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78008 for 1889 contacts (-41.3/contact) +
2D Compatibility (PS) -26856 + (NN) -10302 + (LL) 5744
1D Compatibility (HY) -6400 + (ID) 2100
Total energy: -117922.0 ( -62.43 by residue)
QMean score : 0.325
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