Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLLAGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPSPSEAAT
4BQS Chain:B ((2-170))-APKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPLLAGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPS------


General information:
TITO was launched using:
RESULT:

Template: 4BQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94730 for 1365 contacts (-69.4/contact) +
2D Compatibility (PS) -18999 + (NN) -10118 + (LL) 484
1D Compatibility (HY) -19600 + (ID) 8450
Total energy: -151413.0 ( -110.93 by residue)
QMean score : 0.853

(partial model without unconserved sides chains):
PDB file : Tito_4BQS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BQS-query.scw
PDB file : Tito_Scwrl_4BQS.pdb: