Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLRWITAGESHGRALVAVVEGMVAGVHVTSADIADQLARRRLGYGRGARMTF-----ERDAVTVLSGIRHGSTLGGPIAIEIGNTEWPKWETVMAADPVDPAELADVARNAPLTRPRPGHADYAGMLKYGFDDARPVLERASARETAARVAAGTVARAFLRQALGVEVLSHVISIGASAPYEGPPPRAEDLPAIDASPVRAYDKAAEADMIAQIEAAKKDGDTLGGV--VEAVAL----GLPVGLGSFTSGDHRLDSQLAAAVMGIQAIKGVEIGDGFQTARRRGSRAHDEMYPGPDGVVRSTNRAGGLEGGMTNGQPLRVRAAMKPISTVPRALATVDLATGDEAVAIHQRSDVCAVPAAGVVVETMVALVLARAALEKFGGDSLAETQRNIAAYQRSVADREAPAARVSG |
1UM0 Chain:D ((7-348)) | FLRLTTFGESHGDVIGGVLDGMPSGIKIDYALLENEMKRR-----QGGRNVFITPRKEDDKVEITSGVFEDFSTGTPIGFLIHNQR---------ARSKDYDNIKNLF--------RPSHADFTYFHKYGIRDFRGG-GRSSARESAIRVAAGAFAKMLLRE-IGIVCESGIIEIG------GIKAKNYDFNHALKSEIFALDEEQEEAQKTAIQNAIKNHDSIGGVALIRARSIKTNQKLPIGLGQGLYA--KLDAKIAEAMMGLNGVKAVEIGKGVESSLLKGSEYNDLM----DQKGFLSNRSGGVLGGMSNGEEIIVRVHFKPTPSIFQPQRTIDINGNECECLLKGRHDPCIAIRGSVVCESLLALVLADMVL---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UM0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130156 for 2680 contacts (-48.6/contact) +
2D Compatibility (PS) -35553 + (NN) -12174 + (LL) 3508
1D Compatibility (HY) -21600 + (ID) 6100
Total energy: -202075.0 ( -75.40 by residue)
QMean score : 0.393
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