Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGHLTPVAAPRLACAFVPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQVSVSMV--TNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPKGDGTGGP---GYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANAGPNTNSSQFFM-VYRDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD |
2A2N Chain:C ((17-175)) | -----------------------------------------------------------------------------------------------------------------------------------------PKRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMI---QTGDPTGTGMGGESIWGGEFEDEFHSTL------RHDRPY-----TLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRV-TKGMEVVQRISNVKV--NPKTDKPYEDVSIINITV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A2N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68277 for 1177 contacts (-58.0/contact) +
2D Compatibility (PS) -16429 + (NN) -9799 + (LL) 8568
1D Compatibility (HY) -9600 + (ID) 2900
Total energy: -98437.0 ( -83.63 by residue)
QMean score : 0.515
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