Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSTRRDLPQSPYLAAVTGRKPSRVPVWFMRQAGRSLPEYRALRERYS-MLAACFEPDVACEITLQPIRRY-DVDAAILFSDIVVPLRAAGVDLDIVADVGPVIADPVRTAADVAAMKPLDP-QAIQPVLVAASLLVAEL-GDVPLIGFAGAPFTLASYLVEGGPSRHHAHVKAMMLAEPASWHALMAKLTDLTIAFLVGQIDAGVDAIQVFDSWAGALSPIDYRQYVLPHSARVFAAL-GEHG---VPMTHFGVGTAELLGAMSEAVTAGERPGRGA-VVGVDWRTPLTDAAARVVPGTALQGNLDPAVVLAGWPAVERAARAVVDDGRRAVDAGAAGHIFNLGHGVLPESDPAVLADLVSLVHSL |
4WSH Chain:B ((12-357)) | ------LKNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAGDFMSLCMNPELACEVTLQPLDRYPQLDAAILFSDILTIPDAMGQGLY------PRFRKVVSSLADIEALPVPDPEQDLGYVMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPKAMHALLDKLAQSVTSYLNGQIHAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRKIVDGLIREHDGRRVPVILFTKGGGLWLESMAEV---------GAEALGLDWTCDIGSARARVGERVALQGNMDPSVLYAN-PAAIRAEVARI----LAAYGKGTGHVFNLGHGITPEVDPAHAGAFFEAVHEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WSH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250872 for 2976 contacts (-84.3/contact) +
2D Compatibility (PS) -36085 + (NN) -17847 + (LL) 980
1D Compatibility (HY) -25200 + (ID) 7400
Total energy: -336424.0 ( -113.05 by residue)
QMean score : 0.544
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