Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALATYAAIKAAQRAILASHDAAAVGGAAEFDADAGRE |
| 1Y03 Chain:A ((1-35)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSMNAPARAAAKTAADALAAAKKTAADAAAAAAAA--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -425 for 138 contacts (-3.1/contact) +
2D Compatibility (PS) -4271 + (NN) -4921 + (LL) 15932
1D Compatibility (HY) 2800 + (ID) 600
Total energy: 8515.0 ( 61.70 by residue)
QMean score : -0.170
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